All agents
Specialised agent

Revision Super Agent

Omi's specialised co-pilot for revision super work

I review your entire analysis end-to-end — catch errors, suggest improvements, polish figures, ensure reproducibility, and give you peer-review-style feedback before reviewers do. Think of me as a friendly senior co-author doing one last careful pass over everything you ran.

What I can do for you

I retrace every step of your Omi session — QC, normalization, integration, clustering, annotation, downstream analyses — and flag anything that looks fragile, inconsistent, or hard to defend in review.

I improve your figures: better color palettes, readable fonts, consistent legends, panel layouts that fit a Nature/Cell figure grid, and alt-text suggestions for accessibility.

I check reproducibility — software versions, seeds, parameter choices, missing citations — and produce a clean checklist so your analysis can be re-run by a reviewer or collaborator without surprises.

I generate peer-review-style feedback: the questions Reviewer 2 will almost certainly ask, suggested rebuttal points, and concrete experiments or extra analyses that would make your story bullet-proof.

Examples of what you can ask me

Copy any of these straight into the demo, or adapt them to your data.

  • 1"Review my whole analysis and tell me what a reviewer would criticize."
  • 2"Improve all my figures for a Nature submission — colors, fonts, layout."
  • 3"Check the reproducibility of my pipeline and list anything missing."
  • 4"Suggest 3 extra analyses that would strengthen my main conclusion."
  • 5"Find inconsistencies between my Methods text and what I actually ran."
  • 6"Give me a peer-review-style report on my single-cell paper draft."

How I work

I run real Scanpy (Python) or Seurat (R) code on the secure MCP server — no hallucinations, no made-up gene lists. Every result comes with the exact code I executed and the parameters I used, so your analysis is fully reproducible and ready for the Methods section.

Best for

First authors finalising a paper, postdocs prepping a revision, PIs doing a last quality check before submission, and anyone who wants a thorough second pair of eyes on their full single-cell analysis.

References

  • Scanpy (Wolf et al., 2018) – Genome Biology
  • Seurat (Hao et al., 2021) – Nature Biotechnology
  • Cell2Sentence (Levine et al., 2024) – Nature Machine Intelligence
  • FAIR principles (Wilkinson et al., 2016) – Scientific Data

Try Revision Super now

Jump into the demo with a starter prompt already loaded. Upload your data, or play with our example dataset first.

Other agents you might like

TCR Agent

Track clonotypes and link them to gene expression.

Learn more

Multiomics Agent

Integrate scRNA + scATAC and more.

Learn more

Mutation Calling Agent

Detect variants in single cells.

Learn more